LiverMesh is a class to handle a polygon mesh for a liver. It uses 3D texture for the bump map and 2D texture for the colour. More...

#include <LiverMesh.h>

Inheritance diagram for gVirtualXRay::LiverMesh:

Collaboration diagram for gVirtualXRay::LiverMesh:

Public Member Functions
	LiverMesh (bool optimize_texture_coordinates=true, unsigned int texture_2D_size=512, unsigned int texture_3D_size=32)
	Default Constructor. More...

virtual	~LiverMesh ()
	Destructor. More...

virtual bool	isSoftTissue () const
	return true if the mesh represent a soft tissue More...

virtual void	updateVBO (int aTypeOfVBO, int aTypeOfPrimitive)
	Update the VBO. More...

virtual void	defineDisplayShaderInput (int aShaderID)
	Link the attributes to their id in the shader. More...

virtual void	initialize ()
	initialize the shaders, the buffers, the normal vectors and the textures More...

virtual bool	isTransparent () const
	return true if the mesh has to be displayed with transparency More...

virtual void	splitFaces ()
	Split each face into four faces. More...

void	splitFaces (bool aPrintDebugInfoFlag=false)
	Split each face into four faces. More...

virtual void	copyFrom (const InternalOrganMesh &aPolygonMesh)

virtual void	copyFrom (const AnatomicalMesh &aPolygonMesh)

virtual void	copyFrom (const PolygonMesh &aPolygonMesh)
	Copy. More...

virtual const std::string &	getLabel () const
	Accessor on the label that determines the type of the mesh. More...

void	reset ()
	Reset the data. More...

void	setDisplayFlag (bool display)
	Set if the mesh is displayed or not. More...

bool	getDisplayFlag () const
	Accessor on the display flag of the polygon mesh. More...

void	display ()
	Display the triangular mesh using OpenGL. More...

void	displayWireFrame ()
	Display the triangular mesh in wireframe using OpenGL. More...

void	displayFaceNormal (RATIONAL_NUMBER aNormalSize=0.5 *cm)
	Display the face normal vectors. More...

void	displayVertexNormal (RATIONAL_NUMBER aNormalSize=0.5 *cm)
	Display the vertex normal vectors. More...

void	setFilename (const char *aFilename)
	Set the name of the file that contains the polygon mesh. More...

void	setFilename (const std::string &aFilename)
	Set the name of the file that contains the polygon mesh. More...

void	setFileName (const char *aFilename)
	Set the name of the file that contains the polygon mesh. More...

void	setFileName (const std::string &aFilename)
	Set the name of the file that contains the polygon mesh. More...

const std::string &	getFilename () const
	Accessor on the name of the file that contains the polygon mesh. More...

const RATIONAL_NUMBER &	getUnitOfLength () const
	Accessor on the unit of length of the mesh. More...

void	loadSTLFile (bool aMoveToCentreFlag, bool anAutoComputeNormalFlag, bool aPrintDebugInfoFlag, bool aCreateVBOFlag, RATIONAL_NUMBER aScale, int aBufferUsageHing)
	Set the name of the file that contains the polygon mesh. More...

void	writeSTLFile ()
	Write the STL file. More...

void	moveToCentre ()
	Move the polygon to the centre. More...

void	moveToCenter ()
	Move the polygon to the center. More...

void	computeNormalVectors ()
	Compute the normal vectors using the cross product method. More...

bool	useVBO (int aBufferUsageHing, int aTypeOfPrimitive)
	Use a vertex buffer object if possible. More...

void	setHU (short HU)

void	setHounsfieldUnit (short HU)

void	setHounsfieldValue (short HU)

void	setElement (unsigned short Z)

void	setElement (const std::string &aName)

void	setMixture (const Mixture &aMixture)

void	setMixture (const std::map< int, double > &aMixture)

void	setMixture (const std::map< std::string, double > &aMixture)

void	setMixture (const std::string &aName)

void	setCompound (const std::string &aName)

void	setMassAttenuationCoefficient (double aCoefficient)

void	setLinearAttenuationCoefficient (double aCoefficient)

void	setDensity (double aDensity)

double	getDensity ()

const std::string &	getMaterialLabel () const

std::string	getCompound () const
	Accessor on the compound description of the polygon mesh. More...

std::vector< int >	getMixtureElementSet () const
	Accessor on the element Z number set of the mixture of the polygon mesh. More...

std::vector< double >	getMixtureWeightSet () const
	Accessor on the element weight set of the mixture of the polygon mesh. More...

const PhotonCrossSection &	getPhotonCrossSection () const

const VEC3 &	getLocalMinCorner () const
	Accessor on the bounding box lower corner. More...

const VEC3 &	getLocalMaxCorner () const
	Accessor on the bounding box upper corner. More...

void	applyTranslation (const VEC3 &aTranslationVector)

void	applyScaling (RATIONAL_NUMBER x, RATIONAL_NUMBER y, RATIONAL_NUMBER z)

void	applyRotation (const VEC3 &aRotationAxis, RATIONAL_NUMBER aRotationAngleInDegrees)

void	applyTransform (const MATRIX4 &aTransformationMatrix)

unsigned int	getFaceNumber () const
	Accessor on the number of faces. More...

unsigned int	getTriangleNumber () const
	Accessor on the number of triangles. More...

unsigned int	getFaceNormalNumber () const
	Accessor on the number of face normal vectors. More...

unsigned int	getVertexNormalNumber () const
	Accessor on the number of vertex normal vectors. More...

unsigned int	getVertexNumber () const
	Accessor on the number of vertices. More...

unsigned int	getIndexNumber () const
	Accessor on the number of indices. More...

void	mergeVertices (bool aPrintDebugInfoFlag=false)

VEC3	getVertex (unsigned int anIndex) const
	Accessor on a given vertex. More...

void	setVertex (unsigned int anIndex, const VEC3 &aVertex)
	Change the value of a given vertex. More...

void	setFaceNormal (unsigned int anIndex, const VEC3 &aNormalVector)

void	setVertexNormal (unsigned int anIndex, const VEC3 &aNormalVector)

int	getIndex (unsigned int anIndex) const
	Accessor on a given index. More...

void	setIndex (unsigned int anIndex, unsigned int aValue)
	Set the value of a given index. More...

VEC3	getFaceNormal (unsigned int anIndex) const
	Accessor on a given face normal. More...

VEC3	getVertexNormal (unsigned int anIndex) const
	Accessor on a given vertex normal. More...

void	setExternalData (int aTypeOfPrimitive, const void aVertexArray, unsigned int aNumberOfVertices, int aVertexDataType, const void anIndexArray, unsigned int aNumberOfIndices, int anIndexDataType, bool aCreateVBOFlag, int aTypeOfVBO)

void	setExternalData (int aTypeOfPrimitive, const std::vector< float > *aVertexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setExternalData (int aTypeOfPrimitive, const std::vector< double > *aVertexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setExternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< unsigned int > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setExternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< unsigned int > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setExternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< unsigned short > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setExternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< unsigned short > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setExternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< unsigned char > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setExternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< unsigned char > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setVBOData (const void aVertexArray, unsigned int aNumberOfVertices, unsigned int aVertexVBO, unsigned int aNormalVBO, unsigned int aTextureVBO, unsigned int anIndexVBO, unsigned int aNumberOfIndices, int anIndexDataType, const void aIndexArray=NULL, const void *aNormalArray=NULL)

void	setInternalData (int aTypeOfPrimitive, const void aVertexArray, unsigned int aNumberOfVertices, int aVertexDataType, const void anIndexArray, unsigned int aNumberOfIndices, int anIndexDataType, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< float > aNormalArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< float > *aVertexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< double > aNormalArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > *aVertexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< unsigned int > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< float > aNormalArray, const std::vector< unsigned int > *anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< unsigned int > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< float > aNormalArray, const std::vector< unsigned int > *anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< unsigned short > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< float > aNormalArray, const std::vector< unsigned short > *anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< unsigned short > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< float > aNormalArray, const std::vector< unsigned short > *anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< unsigned char > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< float > aVertexArray, const std::vector< float > aNormalArray, const std::vector< unsigned char > *anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< unsigned char > anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< float > aNormalArray, const std::vector< unsigned char > *anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< double > aNormalArray, const std::vector< unsigned char > *anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< double > aNormalArray, const std::vector< unsigned short > *anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	setInternalData (int aTypeOfPrimitive, const std::vector< double > aVertexArray, const std::vector< double > aNormalArray, const std::vector< unsigned int > *anIndexArray, bool aCreateVBOFlag, int aTypeOfVBO)

void	applyScale (const RATIONAL_NUMBER &aScale)

void	applyScale (const RATIONAL_NUMBER &aScaleX, const RATIONAL_NUMBER &aScaleY, const RATIONAL_NUMBER &aScaleZ)

void	invertNormalVectors ()
	Inverse the normal vectors. More...

virtual void	updateVBOs (unsigned int aVertexVBO, unsigned int aNormalVBO, unsigned int aTextureVBO, unsigned int anIndexVBO)
	Update the VBOs with VBO already created. More...

const Material &	getMaterial () const
	Accessor on the material of the polygon mesh. More...

Material &	getMaterial ()
	Accessor on the material of the polygon mesh. More...

virtual PolygonMesh	operator+ (const PolygonMesh &aPolygonMesh) const
	operator+. More...

virtual PolygonMesh	operator+ (const VEC3 &aTranslationVector) const
	operator+. More...

virtual PolygonMesh	operator- (const PolygonMesh &aPolygonMesh) const
	operator-. More...

virtual PolygonMesh	operator- (const VEC3 &aTranslationVector) const
	operator-. More...

virtual PolygonMesh &	operator+= (const PolygonMesh &aPolygonMesh)
	operator+=. More...

virtual PolygonMesh &	operator+= (const VEC3 &aTranslationVector)
	operator+=. More...

virtual PolygonMesh &	operator-= (const PolygonMesh &aPolygonMesh)
	operator-=. More...

virtual PolygonMesh &	operator-= (const VEC3 &aTranslationVector)
	operator-=. More...

std::map< RATIONAL_NUMBER, VEC3 >	rayIntersect (const VEC3 &aRayOrigin, const VEC3 &aRayDirection, const MATRIX4 &aTransformationMatrix) const

void	getTriangleVertices (VEC3 &v0, VEC3 &v1, VEC3 &v2, unsigned int anIndex) const

bool	hasNormalVectorsInverted () const
	Check if the normal vectors have been inverted. More...

Protected Types
enum	ToCreate { TO_CREATE_BUMP_MAP, TO_CREATE_COLOUR_TEXTURE }
	To know if a bump map or a colour texture has to be created. More...

Protected Member Functions
virtual void	generateTextures ()
	generates the textures More...

virtual void	defineBumpMapShaderInput (int shader_id)
	Link the attributes to their id in the shader bump map generation. More...

virtual void	defineColourTextureShaderInput (int shader_id)

virtual void	generate2DTexture (Shader const &shader, unsigned int &frame_buffer, ToCreate to_create)
	generates a 2D texture More...

virtual void	generate3DTexture (Shader const &shader, unsigned int &frame_buffer, unsigned int &texture, ToCreate to_create)
	generates a 3D texture More...

virtual void	initialize2DBuffer (unsigned int &aTexture, unsigned int &aFrameBuffer)
	initialize a 2D frame buffer and bind a texture to it More...

virtual void	initialize3DBuffer (unsigned int &aTexture, unsigned int &aFrameBuffer, bool has_colours)
	initialize a 3D frame buffer and bind a texture to its layer 0 More...

virtual void	load2DBumpShader ()
	Load the shader to create the 2D bump map. More...

virtual void	load3DBumpShader ()
	Load the shader to create the 3D bump map. More...

virtual void	initialize2DTextureCoordinates ()

virtual void	initialize3DTextureCoordinates ()
	Initialise 3D texture coordinates. More...

virtual void	shareNormalVectors ()
	Compute a normal vector per vertex for a smoother display. More...

virtual void	deleteIndices ()
	delete the indices and calculate new normal vectors More...

virtual void	initGradientTab ()
	initialize gradient tab for gnoise More...

virtual void	initPermutation ()
	initialize permutation tab for all noises More...

void	computeBoundingBox ()
	Update the bounding box. More...

void	normaliseNormals ()
	Normalise the normal vectors. More...

void	destroyVertexData ()
	Release the memory held by the vertex data if needed. More...

void	destroyIndexData ()
	Release the memory held by the index data if needed. More...

void	removeIndex (bool aPrintDebugInfoFlag=false)
	Remove the index. More...

void	copyVertexSet (const void *apVertexSet)
	Copy a vertex set. More...

void	copyIndexSet (const void *apIndexSet)
	Copy an index set. More...

void	loadASCIISTLFile (bool aMoveToCentreFlag, bool anAutoComputeNormalFlag, bool aPrintDebugInfoFlag, bool aCreateVBOFlag, RATIONAL_NUMBER aScale, int aBufferUsageHing)
	Set the name of the file that contains the polygon mesh. More...

void	loadBinarySTLFile (bool aMoveToCentreFlag, bool anAutoComputeNormalFlag, bool aPrintDebugInfoFlag, bool aCreateVBOFlag, RATIONAL_NUMBER aScale, int aBufferUsageHing)
	Set the name of the file that contains the polygon mesh. More...

void	loadSTLDataFromBinaryStream (const char *apInputData, bool aMoveToCentreFlag, bool anAutoComputeNormalFlag, bool aPrintDebugInfoFlag, bool aCreateVBOFlag, RATIONAL_NUMBER aScale, int aBufferUsageHing)
	Set the name of the file that contains the polygon mesh. More...

Protected Attributes
unsigned int	m_colour_texture

unsigned int	m_colour_texture_frame_buffer

int	m_use_3D_colour_texture

Shader	m_colour_texture_shader

std::vector< VEC3 >	m_gradient_tab

std::vector< int >	m_permutation

std::vector< VEC2 >	m_texture_coordinates_2d

std::vector< VEC3 >	m_texture_coordinates_3d

std::vector< VEC2 >	m_margin_direction

unsigned int	m_bump_map_texture

unsigned int	m_bump_map_frame_buffer

Shader	m_bump_map_shader

int	m_has_tendon

int	m_is_lung

int	m_has_thin_bumps

int	m_use_3D_bump_map

unsigned int	m_texture_size_2d

unsigned int	m_texture_size_3d

bool	m_need_initialize

bool	m_generation_texture_coord_are_set

bool	m_optimize_texture_coordinates

int	m_use_texture
	1 if the mesh use texturing; default value is 0 More...

int	m_use_bump_map
	1 if the mesh use bump mapping; default value is 0 More...

std::string	m_label
	A label to determine the type of the mesh. More...

std::string	m_filename
	Name of the file that contains the polygon mesh. More...

RATIONAL_NUMBER	m_file_scale
	Unit of length of the file that contains the polygon mesh (if negative, then unknown) More...

std::auto_ptr< VBO >	m_p_vbo
	Vertex buffer object. More...

std::auto_ptr< PolygonMesh >	m_p_face_normal_vbo

std::auto_ptr< PolygonMesh >	m_p_vertex_normal_vbo

PhotonCrossSection	m_photon_cross_section
	Material properties, with respect to X-ray. More...

VEC3	m_local_min_corner
	Lower corner of the bounding box. More...

VEC3	m_local_max_corner
	Upper corner of the bounding box. More...

std::vector< RATIONAL_NUMBER >	m_p_vertex_normal_set
	Array containing the normal vectors (one per triangle) More...

void *	m_p_vertex_set
	Array containing the vertices. More...

void *	m_p_index_set
	Array containing the index. More...

unsigned int	m_number_of_indices
	Number of indices. More...

unsigned int	m_number_of_vertices
	Number of vertices. More...

int	m_index_data_type

int	m_vertex_data_type

int	m_polygon_type
	Polygon type; valid values are GL_TRIANGLES. More...

bool	m_external_data_flag

bool	m_display_flag

Material	m_material
	Material of the object. More...

bool	m_has_inverted_normal_vectors
	A flag set to true if the normal vectors are inverted. More...

Detailed Description

LiverMesh is a class to handle a polygon mesh for a liver. It uses 3D texture for the bump map and 2D texture for the colour.

Definition at line 78 of file LiverMesh.h.

Member Enumeration Documentation

◆ ToCreate

enum gVirtualXRay::InternalOrganMesh::ToCreate

protectedinherited

To know if a bump map or a colour texture has to be created.

Enumerator
TO_CREATE_BUMP_MAP
TO_CREATE_COLOUR_TEXTURE

Definition at line 151 of file InternalOrganMesh.h.

Constructor & Destructor Documentation

◆ LiverMesh()

gVirtualXRay::LiverMesh::LiverMesh	(	bool	optimize_texture_coordinates = `true`,
		unsigned int	texture_2D_size = `512`,
		unsigned int	texture_3D_size = `32`
	)

Default Constructor.

◆ ~LiverMesh()

virtual gVirtualXRay::LiverMesh::~LiverMesh ( )

virtual

Destructor.

Member Function Documentation

◆ applyRotation()

void gVirtualXRay::PolygonMesh::applyRotation	(	const VEC3 &	aRotationAxis,
		RATIONAL_NUMBER	aRotationAngleInDegrees
	)

inlineinherited

Rotate the polygon mesh given a rotation axis and angle, and update the VBO if needed.

Parameters

aRotationAxis	the rotation axis
aRotationAngleInDegrees	the rotation angle in degrees

Definition at line 586 of file PolygonMesh.inl.

◆ applyScale() [1/2]

void gVirtualXRay::PolygonMesh::applyScale ( const RATIONAL_NUMBER & aScale )

inlineinherited

Apply a scaling factor to the vertex data. Note that the bounding box will be automatically updated.

Parameters

aScale scaling factor

Definition at line 475 of file PolygonMesh.inl.

◆ applyScale() [2/2]

void gVirtualXRay::PolygonMesh::applyScale	(	const RATIONAL_NUMBER &	aScaleX,
		const RATIONAL_NUMBER &	aScaleY,
		const RATIONAL_NUMBER &	aScaleZ
	)

inherited

Apply a scaling factor to the vertex data. Note that the bounding box will be automatically updated.

Parameters

aScaleX	scaling factor alng the x-axis
aScaleY	scaling factor alng the y-axis
aScaleZ	scaling factor alng the z-axis

◆ applyScaling()

void gVirtualXRay::PolygonMesh::applyScaling	(	RATIONAL_NUMBER	x,
		RATIONAL_NUMBER	y,
		RATIONAL_NUMBER	z
	)

inlineinherited

Scale the polygon mesh given scaling factors, and update the VBO if needed.

Parameters

x	the scaling factor along the X-axis
y	the scaling factor along the Y-axis
z	the scaling factor along the Z-axis

Definition at line 516 of file PolygonMesh.inl.

◆ applyTransform()

void gVirtualXRay::PolygonMesh::applyTransform ( const MATRIX4 & aTransformationMatrix )

inlineinherited

Transform the polygon mesh given a transformation matrix and update the VBO if needed.

Parameters

aTransformationMatrix the transformation matrix

Definition at line 636 of file PolygonMesh.inl.

◆ applyTranslation()

void gVirtualXRay::PolygonMesh::applyTranslation ( const VEC3 & aTranslationVector )

inlineinherited

Translate the polygon mesh given a translation vector, and update the VBO if needed.

Parameters

aTranslationVector the translation vector

Definition at line 483 of file PolygonMesh.inl.

◆ computeBoundingBox()

void gVirtualXRay::PolygonMesh::computeBoundingBox ( )

inlineprotectedinherited

Update the bounding box.

Definition at line 439 of file PolygonMesh.inl.

◆ computeNormalVectors()

void gVirtualXRay::PolygonMesh::computeNormalVectors ( )

inherited

Compute the normal vectors using the cross product method.

◆ copyFrom() [1/3]

virtual void gVirtualXRay::AnatomicalMesh::copyFrom ( const AnatomicalMesh & aPolygonMesh )

virtualinherited

◆ copyFrom() [2/3]

virtual void gVirtualXRay::InternalOrganMesh::copyFrom ( const InternalOrganMesh & aPolygonMesh )

virtualinherited

◆ copyFrom() [3/3]

virtual void gVirtualXRay::PolygonMesh::copyFrom ( const PolygonMesh & aPolygonMesh )

virtualinherited

Copy.

Parameters

aPolygonMesh the polygon mesh to copy

◆ copyIndexSet()

void gVirtualXRay::PolygonMesh::copyIndexSet ( const void * apIndexSet )

protectedinherited

Copy an index set.

◆ copyVertexSet()

void gVirtualXRay::PolygonMesh::copyVertexSet ( const void * apVertexSet )

protectedinherited

Copy a vertex set.

◆ defineBumpMapShaderInput()

virtual void gVirtualXRay::SoftTissueMesh::defineBumpMapShaderInput ( int shader_id )

protectedvirtualinherited

Link the attributes to their id in the shader bump map generation.

Reimplemented from gVirtualXRay::InternalOrganMesh.

Reimplemented in gVirtualXRay::LungsMesh, and gVirtualXRay::DiaphragmMesh.

◆ defineColourTextureShaderInput()

virtual void gVirtualXRay::SoftTissueMesh::defineColourTextureShaderInput ( int shader_id )

protectedvirtualinherited

Link the attributes to their id in the shader for colour texture generation

Implements gVirtualXRay::InternalOrganMesh.

Reimplemented in gVirtualXRay::LungsMesh, and gVirtualXRay::DiaphragmMesh.

◆ defineDisplayShaderInput()

virtual void gVirtualXRay::SoftTissueMesh::defineDisplayShaderInput ( int aShaderID )

virtualinherited

Link the attributes to their id in the shader.

Reimplemented from gVirtualXRay::InternalOrganMesh.

◆ deleteIndices()

virtual void gVirtualXRay::InternalOrganMesh::deleteIndices ( )

protectedvirtualinherited

delete the indices and calculate new normal vectors

◆ destroyIndexData()

void gVirtualXRay::PolygonMesh::destroyIndexData ( )

protectedinherited

Release the memory held by the index data if needed.

◆ destroyVertexData()

void gVirtualXRay::PolygonMesh::destroyVertexData ( )

protectedinherited

Release the memory held by the vertex data if needed.

◆ display()

void gVirtualXRay::PolygonMesh::display ( )

inherited

Display the triangular mesh using OpenGL.

◆ displayFaceNormal()

void gVirtualXRay::PolygonMesh::displayFaceNormal ( RATIONAL_NUMBER aNormalSize = 0.5 *cm )

inherited

Display the face normal vectors.

Parameters

aNormalSize the size of the vectors (default value is 0.5 cm)

◆ displayVertexNormal()

void gVirtualXRay::PolygonMesh::displayVertexNormal ( RATIONAL_NUMBER aNormalSize = 0.5 *cm )

inherited

Display the vertex normal vectors.

Parameters

aNormalSize the size of the vectors (default value is 0.5 cm)

◆ displayWireFrame()

void gVirtualXRay::PolygonMesh::displayWireFrame ( )

inherited

Display the triangular mesh in wireframe using OpenGL.

◆ generate2DTexture()

virtual void gVirtualXRay::InternalOrganMesh::generate2DTexture	(	Shader const &	shader,
		unsigned int &	frame_buffer,
		ToCreate	to_create
	)

protectedvirtualinherited

generates a 2D texture

◆ generate3DTexture()

virtual void gVirtualXRay::InternalOrganMesh::generate3DTexture	(	Shader const &	shader,
		unsigned int &	frame_buffer,
		unsigned int &	texture,
		ToCreate	to_create
	)

protectedvirtualinherited

generates a 3D texture

◆ generateTextures()

virtual void gVirtualXRay::SoftTissueMesh::generateTextures ( )

protectedvirtualinherited

generates the textures

Implements gVirtualXRay::InternalOrganMesh.

◆ getCompound()

std::string gVirtualXRay::PolygonMesh::getCompound ( ) const

inlineinherited

Accessor on the compound description of the polygon mesh.

Returns: if the sample is made of a compound, then return the description of the compound (e.g. H2O for water), otherwise return an empty string

Definition at line 290 of file PolygonMesh.inl.

◆ getDensity()

double gVirtualXRay::PolygonMesh::getDensity ( )

inlineinherited

Definition at line 274 of file PolygonMesh.inl.

◆ getDisplayFlag()

bool gVirtualXRay::PolygonMesh::getDisplayFlag ( ) const

inlineinherited

Accessor on the display flag of the polygon mesh.

Returns: display flag

Definition at line 99 of file PolygonMesh.inl.

◆ getFaceNormal()

VEC3 gVirtualXRay::PolygonMesh::getFaceNormal ( unsigned int anIndex ) const

inlineinherited

Accessor on a given face normal.

Parameters

anIndex the index of the normal to access

Returns: the normal

Definition at line 377 of file PolygonMesh.inl.

◆ getFaceNormalNumber()

unsigned int gVirtualXRay::PolygonMesh::getFaceNormalNumber ( ) const

inlineinherited

Accessor on the number of face normal vectors.

Returns: the number of face normal vectors

Definition at line 340 of file PolygonMesh.inl.

◆ getFaceNumber()

unsigned int gVirtualXRay::PolygonMesh::getFaceNumber ( ) const

inherited

Accessor on the number of faces.

Returns: the number of faces

◆ getFilename()

const std::string & gVirtualXRay::PolygonMesh::getFilename ( ) const

inlineinherited

Accessor on the name of the file that contains the polygon mesh.

Returns: the file name

Definition at line 143 of file PolygonMesh.inl.

◆ getIndex()

int gVirtualXRay::PolygonMesh::getIndex ( unsigned int anIndex ) const

inherited

Accessor on a given index.

Parameters

anIndex the index of the index to access

Returns: the index

◆ getIndexNumber()

unsigned int gVirtualXRay::PolygonMesh::getIndexNumber ( ) const

inlineinherited

Accessor on the number of indices.

Returns: the number of indices

Definition at line 369 of file PolygonMesh.inl.

◆ getLabel()

virtual const std::string& gVirtualXRay::AnatomicalMesh::getLabel ( ) const

virtualinherited

Accessor on the label that determines the type of the mesh.

◆ getLocalMaxCorner()

const VEC3 & gVirtualXRay::PolygonMesh::getLocalMaxCorner ( ) const

inlineinherited

Accessor on the bounding box upper corner.

Returns: the bounding box upper corner

Definition at line 331 of file PolygonMesh.inl.

◆ getLocalMinCorner()

const VEC3 & gVirtualXRay::PolygonMesh::getLocalMinCorner ( ) const

inlineinherited

Accessor on the bounding box lower corner.

Returns: the bounding box lower corner

Definition at line 322 of file PolygonMesh.inl.

◆ getMaterial() [1/2]

const Material & gVirtualXRay::PolygonMesh::getMaterial ( ) const

inlineinherited

Accessor on the material of the polygon mesh.

Returns: the material

Definition at line 762 of file PolygonMesh.inl.

◆ getMaterial() [2/2]

Material & gVirtualXRay::PolygonMesh::getMaterial ( )

inlineinherited

Accessor on the material of the polygon mesh.

Returns: the material

Definition at line 770 of file PolygonMesh.inl.

◆ getMaterialLabel()

const std::string & gVirtualXRay::PolygonMesh::getMaterialLabel ( ) const

inlineinherited

Definition at line 282 of file PolygonMesh.inl.

◆ getMixtureElementSet()

std::vector< int > gVirtualXRay::PolygonMesh::getMixtureElementSet ( ) const

inlineinherited

Accessor on the element Z number set of the mixture of the polygon mesh.

Returns: if the sample is made of a mixture, then return the element Z number set of the mixture, otherwise return an empty vector

Definition at line 298 of file PolygonMesh.inl.

◆ getMixtureWeightSet()

std::vector< double > gVirtualXRay::PolygonMesh::getMixtureWeightSet ( ) const

inlineinherited

Accessor on the element weight set of the mixture of the polygon mesh.

Returns: if the sample is made of a mixture, then return the element weight set of the mixture, otherwise return an empty vector

Definition at line 306 of file PolygonMesh.inl.

◆ getPhotonCrossSection()

const PhotonCrossSection & gVirtualXRay::PolygonMesh::getPhotonCrossSection ( ) const

inlineinherited

Definition at line 267 of file PolygonMesh.inl.

◆ getTriangleNumber()

unsigned int gVirtualXRay::PolygonMesh::getTriangleNumber ( ) const

inherited

Accessor on the number of triangles.

Returns: the number of triangles

◆ getTriangleVertices()

void gVirtualXRay::PolygonMesh::getTriangleVertices	(	VEC3 &	v0,
		VEC3 &	v1,
		VEC3 &	v2,
		unsigned int	anIndex
	)		const

inherited

◆ getUnitOfLength()

const RATIONAL_NUMBER & gVirtualXRay::PolygonMesh::getUnitOfLength ( ) const

inlineinherited

Accessor on the unit of length of the mesh.

Returns: the unit of length

Definition at line 152 of file PolygonMesh.inl.

◆ getVertex()

VEC3 gVirtualXRay::PolygonMesh::getVertex ( unsigned int anIndex ) const

inherited

Accessor on a given vertex.

Parameters

anIndex the index of the vertex to access

Returns: the vertex

◆ getVertexNormal()

VEC3 gVirtualXRay::PolygonMesh::getVertexNormal ( unsigned int anIndex ) const

inlineinherited

Accessor on a given vertex normal.

Parameters

anIndex the index of the normal to access

Returns: the normal

Definition at line 424 of file PolygonMesh.inl.

◆ getVertexNormalNumber()

unsigned int gVirtualXRay::PolygonMesh::getVertexNormalNumber ( ) const

inlineinherited

Accessor on the number of vertex normal vectors.

Returns: the number of vertex normal vectors

Definition at line 351 of file PolygonMesh.inl.

◆ getVertexNumber()

unsigned int gVirtualXRay::PolygonMesh::getVertexNumber ( ) const

inlineinherited

Accessor on the number of vertices.

Returns: the number of vertices

Definition at line 361 of file PolygonMesh.inl.

◆ hasNormalVectorsInverted()

bool gVirtualXRay::PolygonMesh::hasNormalVectorsInverted ( ) const

inlineinherited

Check if the normal vectors have been inverted.

Returns: true if the normal vectors have been inverted; false otherwise.

Definition at line 314 of file PolygonMesh.inl.

◆ initGradientTab()

virtual void gVirtualXRay::InternalOrganMesh::initGradientTab ( )

protectedvirtualinherited

initialize gradient tab for gnoise

◆ initialize()

virtual void gVirtualXRay::SoftTissueMesh::initialize ( )

virtualinherited

initialize the shaders, the buffers, the normal vectors and the textures

Implements gVirtualXRay::InternalOrganMesh.

◆ initialize2DBuffer()

virtual void gVirtualXRay::InternalOrganMesh::initialize2DBuffer	(	unsigned int &	aTexture,
		unsigned int &	aFrameBuffer
	)

protectedvirtualinherited

initialize a 2D frame buffer and bind a texture to it

◆ initialize2DTextureCoordinates()

virtual void gVirtualXRay::InternalOrganMesh::initialize2DTextureCoordinates ( )

protectedvirtualinherited

Initialise optimised texture coordinates by sharing an hypothenuse in the texture for two adjacent polygons.

◆ initialize3DBuffer()

virtual void gVirtualXRay::InternalOrganMesh::initialize3DBuffer	(	unsigned int &	aTexture,
		unsigned int &	aFrameBuffer,
		bool	has_colours
	)

protectedvirtualinherited

initialize a 3D frame buffer and bind a texture to its layer 0

◆ initialize3DTextureCoordinates()

virtual void gVirtualXRay::InternalOrganMesh::initialize3DTextureCoordinates ( )

protectedvirtualinherited

Initialise 3D texture coordinates.

◆ initPermutation()

virtual void gVirtualXRay::InternalOrganMesh::initPermutation ( )

protectedvirtualinherited

initialize permutation tab for all noises

◆ invertNormalVectors()

void gVirtualXRay::PolygonMesh::invertNormalVectors ( )

inlineinherited

Inverse the normal vectors.

Definition at line 694 of file PolygonMesh.inl.

◆ isSoftTissue()

virtual bool gVirtualXRay::SoftTissueMesh::isSoftTissue ( ) const

virtualinherited

return true if the mesh represent a soft tissue

Implements gVirtualXRay::InternalOrganMesh.

◆ isTransparent()

virtual bool gVirtualXRay::InternalOrganMesh::isTransparent ( ) const

virtualinherited

return true if the mesh has to be displayed with transparency

Implements gVirtualXRay::AnatomicalMesh.

◆ load2DBumpShader()

virtual void gVirtualXRay::InternalOrganMesh::load2DBumpShader ( )

protectedvirtualinherited

Load the shader to create the 2D bump map.

◆ load3DBumpShader()

virtual void gVirtualXRay::InternalOrganMesh::load3DBumpShader ( )

protectedvirtualinherited

Load the shader to create the 3D bump map.

◆ loadASCIISTLFile()

void gVirtualXRay::PolygonMesh::loadASCIISTLFile	(	bool	aMoveToCentreFlag,
		bool	anAutoComputeNormalFlag,
		bool	aPrintDebugInfoFlag,
		bool	aCreateVBOFlag,
		RATIONAL_NUMBER	aScale,
		int	aBufferUsageHing
	)

protectedinherited

Set the name of the file that contains the polygon mesh.

Parameters

aMoveToCentreFlag	a flag to move the polygon to the center or not
anAutoComputeNormalFlag	a flag to compute normals or not
aPrintDebugInfoFlag	a flag to display additional debug information in the console or not
aCreateVBOFlag	a flag to use a vertex buffer object or not
aScale	the unit in which data is stored in the file (e.g. mm, cm, m)
aBufferUsageHing	the buffer usage hint; valid values are: GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ loadBinarySTLFile()

void gVirtualXRay::PolygonMesh::loadBinarySTLFile	(	bool	aMoveToCentreFlag,
		bool	anAutoComputeNormalFlag,
		bool	aPrintDebugInfoFlag,
		bool	aCreateVBOFlag,
		RATIONAL_NUMBER	aScale,
		int	aBufferUsageHing
	)

protectedinherited

Set the name of the file that contains the polygon mesh.

Parameters

aMoveToCentreFlag	a flag to move the polygon to the center or not
anAutoComputeNormalFlag	a flag to compute normals or not
aPrintDebugInfoFlag	a flag to display additional debug information in the console or not
aCreateVBOFlag	a flag to use a vertex buffer object or not
aScale	the unit in which data is stored in the file (e.g. mm, cm, m)
aBufferUsageHing	the buffer usage hint; valid values are: GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ loadSTLDataFromBinaryStream()

void gVirtualXRay::PolygonMesh::loadSTLDataFromBinaryStream	(	const char *	apInputData,
		bool	aMoveToCentreFlag,
		bool	anAutoComputeNormalFlag,
		bool	aPrintDebugInfoFlag,
		bool	aCreateVBOFlag,
		RATIONAL_NUMBER	aScale,
		int	aBufferUsageHing
	)

protectedinherited

Set the name of the file that contains the polygon mesh.

Parameters

apInputData	the input data to load
aMoveToCentreFlag	a flag to move the polygon to the centre or not
anAutoComputeNormalFlag	a flag to compute normals or nor
aPrintDebugInfoFlag	a flag to display additional debug information in the console or not
aCreateVBOFlag	a flag to use a vertex buffer object or not
aScale	the unit in which data is stored in the file (e.g. mm, cm, m)
aBufferUsageHing	the buffer usage hint; valid values are: GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ loadSTLFile()

void gVirtualXRay::PolygonMesh::loadSTLFile	(	bool	aMoveToCentreFlag,
		bool	anAutoComputeNormalFlag,
		bool	aPrintDebugInfoFlag,
		bool	aCreateVBOFlag,
		RATIONAL_NUMBER	aScale,
		int	aBufferUsageHing
	)

inherited

Set the name of the file that contains the polygon mesh.

Parameters

aMoveToCentreFlag	a flag to move the polygon to the center or not
anAutoComputeNormalFlag	a flag to compute normals or not
aPrintDebugInfoFlag	a flag to display additional debug information in the console or not
aCreateVBOFlag	a flag to use a vertex buffer object or not
aScale	the unit in which data is stored in the file (e.g. mm, cm, m)
aBufferUsageHing	the buffer usage hint; valid values are: GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ mergeVertices()

void gVirtualXRay::PolygonMesh::mergeVertices ( bool aPrintDebugInfoFlag = false )

inherited

Merge the vertices of the mesh if the data is managed by the class instance, and if no index has been build.

◆ moveToCenter()

void gVirtualXRay::PolygonMesh::moveToCenter ( )

inlineinherited

Move the polygon to the center.

Definition at line 160 of file PolygonMesh.inl.

◆ moveToCentre()

void gVirtualXRay::PolygonMesh::moveToCentre ( )

inlineinherited

Move the polygon to the centre.

Definition at line 683 of file PolygonMesh.inl.

◆ normaliseNormals()

void gVirtualXRay::PolygonMesh::normaliseNormals ( )

protectedinherited

Normalise the normal vectors.

◆ operator+() [1/2]

virtual PolygonMesh gVirtualXRay::PolygonMesh::operator+ ( const PolygonMesh & aPolygonMesh ) const

virtualinherited

operator+.

Parameters

aPolygonMesh the polygon mesh to add

Returns: the new PolygonMesh

◆ operator+() [2/2]

virtual PolygonMesh gVirtualXRay::PolygonMesh::operator+ ( const VEC3 & aTranslationVector ) const

virtualinherited

operator+.

Parameters

aTranslationVector the translation vector

Returns: the new PolygonMesh

◆ operator+=() [1/2]

virtual PolygonMesh& gVirtualXRay::PolygonMesh::operator+= ( const PolygonMesh & aPolygonMesh )

virtualinherited

operator+=.

Parameters

aPolygonMesh the polygon mesh to add

Returns: the new PolygonMesh

◆ operator+=() [2/2]

virtual PolygonMesh& gVirtualXRay::PolygonMesh::operator+= ( const VEC3 & aTranslationVector )

virtualinherited

operator+=.

Parameters

aTranslationVector the translation vector

Returns: the new PolygonMesh

◆ operator-() [1/2]

virtual PolygonMesh gVirtualXRay::PolygonMesh::operator- ( const PolygonMesh & aPolygonMesh ) const

virtualinherited

operator-.

Parameters

aPolygonMesh the polygon mesh to remove

Returns: the new PolygonMesh

◆ operator-() [2/2]

virtual PolygonMesh gVirtualXRay::PolygonMesh::operator- ( const VEC3 & aTranslationVector ) const

virtualinherited

operator-.

Parameters

aTranslationVector the translation vector

Returns: the new PolygonMesh

◆ operator-=() [1/2]

virtual PolygonMesh& gVirtualXRay::PolygonMesh::operator-= ( const PolygonMesh & aPolygonMesh )

virtualinherited

operator-=.

Parameters

aPolygonMesh the polygon mesh to remove

Returns: the new PolygonMesh

◆ operator-=() [2/2]

virtual PolygonMesh& gVirtualXRay::PolygonMesh::operator-= ( const VEC3 & aTranslationVector )

virtualinherited

operator-=.

Parameters

aTranslationVector the translation vector

Returns: the new PolygonMesh

◆ rayIntersect()

std::map<RATIONAL_NUMBER, VEC3> gVirtualXRay::PolygonMesh::rayIntersect	(	const VEC3 &	aRayOrigin,
		const VEC3 &	aRayDirection,
		const MATRIX4 &	aTransformationMatrix
	)		const

inherited

◆ removeIndex()

void gVirtualXRay::PolygonMesh::removeIndex ( bool aPrintDebugInfoFlag = false )

protectedinherited

Remove the index.

◆ reset()

void gVirtualXRay::PolygonMesh::reset ( )

inherited

Reset the data.

◆ setCompound()

void gVirtualXRay::PolygonMesh::setCompound ( const std::string & aName )

inlineinherited

Definition at line 243 of file PolygonMesh.inl.

◆ setDensity()

void gVirtualXRay::PolygonMesh::setDensity ( double aDensity )

inlineinherited

Definition at line 261 of file PolygonMesh.inl.

◆ setDisplayFlag()

void gVirtualXRay::PolygonMesh::setDisplayFlag ( bool display )

inlineinherited

Set if the mesh is displayed or not.

Parameters

display true or false

Definition at line 91 of file PolygonMesh.inl.

◆ setElement() [1/2]

void gVirtualXRay::PolygonMesh::setElement ( unsigned short Z )

inlineinherited

Definition at line 207 of file PolygonMesh.inl.

◆ setElement() [2/2]

void gVirtualXRay::PolygonMesh::setElement ( const std::string & aName )

inlineinherited

Definition at line 213 of file PolygonMesh.inl.

◆ setExternalData() [1/9]

void gVirtualXRay::PolygonMesh::setExternalData	(	int	aTypeOfPrimitive,
		const void *	aVertexArray,
		unsigned int	aNumberOfVertices,
		int	aVertexDataType,
		const void *	anIndexArray,
		unsigned int	aNumberOfIndices,
		int	anIndexDataType,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will not manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNumberOfVertices	number of vertices
aVertexDataType	data type of the vertex data; valid values are GL_FLOAT, GL_DOUBLE and GL_NONE
anIndexArray	array containing the index data
aNumberOfIndices	number of indices
anIndexDataType	data type of the index data; valid values are GL_UNSIGNED_INT, GL_UNSIGNED_SHORT, GL_UNSIGNED_BYTE and GL_NONE
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setExternalData() [2/9]

void gVirtualXRay::PolygonMesh::setExternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will not manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setExternalData() [3/9]

void gVirtualXRay::PolygonMesh::setExternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will not manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setExternalData() [4/9]

void gVirtualXRay::PolygonMesh::setExternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< unsigned int > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will not manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setExternalData() [5/9]

void gVirtualXRay::PolygonMesh::setExternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< unsigned int > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will not manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setExternalData() [6/9]

void gVirtualXRay::PolygonMesh::setExternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< unsigned short > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will not manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setExternalData() [7/9]

void gVirtualXRay::PolygonMesh::setExternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< unsigned short > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will not manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setExternalData() [8/9]

void gVirtualXRay::PolygonMesh::setExternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< unsigned char > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will not manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setExternalData() [9/9]

void gVirtualXRay::PolygonMesh::setExternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< unsigned char > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will not manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setFaceNormal()

void gVirtualXRay::PolygonMesh::setFaceNormal	(	unsigned int	anIndex,
		const VEC3 &	aNormalVector
	)

inlineinherited

Definition at line 552 of file PolygonMesh.inl.

◆ setFilename() [1/2]

void gVirtualXRay::PolygonMesh::setFilename ( const char * aFilename )

inlineinherited

Set the name of the file that contains the polygon mesh.

Parameters

aFilename the file name

Definition at line 107 of file PolygonMesh.inl.

◆ setFilename() [2/2]

void gVirtualXRay::PolygonMesh::setFilename ( const std::string & aFilename )

inlineinherited

Set the name of the file that contains the polygon mesh.

Parameters

aFilename the file name

Definition at line 116 of file PolygonMesh.inl.

◆ setFileName() [1/2]

void gVirtualXRay::PolygonMesh::setFileName ( const char * aFilename )

inlineinherited

Set the name of the file that contains the polygon mesh.

Parameters

aFilename the file name

Definition at line 125 of file PolygonMesh.inl.

◆ setFileName() [2/2]

void gVirtualXRay::PolygonMesh::setFileName ( const std::string & aFilename )

inlineinherited

Set the name of the file that contains the polygon mesh.

Parameters

aFilename the file name

Definition at line 134 of file PolygonMesh.inl.

◆ setHounsfieldUnit()

void gVirtualXRay::PolygonMesh::setHounsfieldUnit ( short HU )

inlineinherited

Definition at line 195 of file PolygonMesh.inl.

◆ setHounsfieldValue()

void gVirtualXRay::PolygonMesh::setHounsfieldValue ( short HU )

inlineinherited

Definition at line 201 of file PolygonMesh.inl.

◆ setHU()

void gVirtualXRay::PolygonMesh::setHU ( short HU )

inlineinherited

Definition at line 189 of file PolygonMesh.inl.

◆ setIndex()

void gVirtualXRay::PolygonMesh::setIndex	(	unsigned int	anIndex,
		unsigned int	aValue
	)

inherited

Set the value of a given index.

Parameters

anIndex	the index of the index to access
aValue	the new value of the index

◆ setInternalData() [1/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const void *	aVertexArray,
		unsigned int	aNumberOfVertices,
		int	aVertexDataType,
		const void *	anIndexArray,
		unsigned int	aNumberOfIndices,
		int	anIndexDataType,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNumberOfVertices	number of vertices
aVertexDataType	data type of the vertex data; valid values are GL_FLOAT, GL_DOUBLE and GL_NONE
anIndexArray	array containing the index data
aNumberOfIndices	number of indices
anIndexDataType	data type of the index data; valid values are GL_UNSIGNED_INT, GL_UNSIGNED_SHORT, GL_UNSIGNED_BYTE and GL_NONE
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [2/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< float > *	aNormalArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [3/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [4/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< double > *	aNormalArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [5/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [6/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< unsigned int > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [7/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< float > *	aNormalArray,
		const std::vector< unsigned int > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

◆ setInternalData() [8/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< unsigned int > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [9/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< float > *	aNormalArray,
		const std::vector< unsigned int > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [10/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< unsigned short > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [11/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< float > *	aNormalArray,
		const std::vector< unsigned short > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [12/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< unsigned short > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [13/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< float > *	aNormalArray,
		const std::vector< unsigned short > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [14/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< unsigned char > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [15/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< float > *	aVertexArray,
		const std::vector< float > *	aNormalArray,
		const std::vector< unsigned char > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [16/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< unsigned char > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [17/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< float > *	aNormalArray,
		const std::vector< unsigned char > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [18/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< double > *	aNormalArray,
		const std::vector< unsigned char > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [19/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< double > *	aNormalArray,
		const std::vector< unsigned short > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setInternalData() [20/20]

void gVirtualXRay::PolygonMesh::setInternalData	(	int	aTypeOfPrimitive,
		const std::vector< double > *	aVertexArray,
		const std::vector< double > *	aNormalArray,
		const std::vector< unsigned int > *	anIndexArray,
		bool	aCreateVBOFlag,
		int	aTypeOfVBO
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES
aVertexArray	array containing the vertex data
aNormalArray	array containing the normal data
anIndexArray	array containing the index data
aCreateVBOFlag	flag set to true to create a VBO, set to false to not set a VBO
aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW

◆ setLinearAttenuationCoefficient()

void gVirtualXRay::PolygonMesh::setLinearAttenuationCoefficient ( double aCoefficient )

inlineinherited

Definition at line 255 of file PolygonMesh.inl.

◆ setMassAttenuationCoefficient()

void gVirtualXRay::PolygonMesh::setMassAttenuationCoefficient ( double aCoefficient )

inlineinherited

Definition at line 249 of file PolygonMesh.inl.

◆ setMixture() [1/4]

void gVirtualXRay::PolygonMesh::setMixture ( const Mixture & aMixture )

inlineinherited

Definition at line 219 of file PolygonMesh.inl.

◆ setMixture() [2/4]

void gVirtualXRay::PolygonMesh::setMixture ( const std::map< int, double > & aMixture )

inlineinherited

Definition at line 225 of file PolygonMesh.inl.

◆ setMixture() [3/4]

void gVirtualXRay::PolygonMesh::setMixture ( const std::map< std::string, double > & aMixture )

inlineinherited

Definition at line 231 of file PolygonMesh.inl.

◆ setMixture() [4/4]

void gVirtualXRay::PolygonMesh::setMixture ( const std::string & aName )

inlineinherited

Definition at line 237 of file PolygonMesh.inl.

◆ setVBOData()

void gVirtualXRay::PolygonMesh::setVBOData	(	const void *	aVertexArray,
		unsigned int	aNumberOfVertices,
		unsigned int	aVertexVBO,
		unsigned int	aNormalVBO,
		unsigned int	aTextureVBO,
		unsigned int	anIndexVBO,
		unsigned int	aNumberOfIndices,
		int	anIndexDataType,
		const void *	aIndexArray = `NULL`,
		const void *	aNormalArray = `NULL`
	)

inherited

Set the polygon mesh using external data. The class instance will manage the memory.

Parameters

aVertexArray	array containing the vertex data
aNumberOfVertices	number of vertices
aVertexVBO	identificator of vbo for vertices
aNormalVBO	identificator of vbo for normals
aTextureVBO	identificator of vbo for texture coords
anIndexVBO	array containing the index data
aNumberOfIndices	number of indices
anIndexDataType	data type of the index data; valid values are GL_UNSIGNED_INT, GL_UNSIGNED_SHORT, GL_UNSIGNED_BYTE and GL_NONE
aIndexArray	array containing the index data
aNormalArray	array containing the normal data

◆ setVertex()

void gVirtualXRay::PolygonMesh::setVertex	(	unsigned int	anIndex,
		const VEC3 &	aVertex
	)

inherited

Change the value of a given vertex.

Parameters

anIndex	the index of the vertex to access
aVertex	the new value of the vertex

◆ setVertexNormal()

void gVirtualXRay::PolygonMesh::setVertexNormal	(	unsigned int	anIndex,
		const VEC3 &	aNormalVector
	)

inlineinherited

Definition at line 570 of file PolygonMesh.inl.

◆ shareNormalVectors()

virtual void gVirtualXRay::InternalOrganMesh::shareNormalVectors ( )

protectedvirtualinherited

Compute a normal vector per vertex for a smoother display.

◆ splitFaces() [1/2]

virtual void gVirtualXRay::InternalOrganMesh::splitFaces ( )

virtualinherited

Split each face into four faces.

◆ splitFaces() [2/2]

void gVirtualXRay::PolygonMesh::splitFaces ( bool aPrintDebugInfoFlag = false )

inherited

Split each face into four faces.

◆ updateVBO()

virtual void gVirtualXRay::SoftTissueMesh::updateVBO	(	int	aTypeOfVBO,
		int	aTypeOfPrimitive
	)

virtualinherited

Update the VBO.

Parameters

aTypeOfVBO	VBO usage hint to set; valid values are GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW
aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES

Reimplemented from gVirtualXRay::PolygonMesh.

◆ updateVBOs()

virtual void gVirtualXRay::PolygonMesh::updateVBOs	(	unsigned int	aVertexVBO,
		unsigned int	aNormalVBO,
		unsigned int	aTextureVBO,
		unsigned int	anIndexVBO
	)

virtualinherited

Update the VBOs with VBO already created.

Parameters

aVertexVBO	identificator of vbo for vertices
aNormalVBO	identificator of vbo for normals
aTextureVBO	identificator of vbo for texture coords
anIndexVBO	array containing the index data

◆ useVBO()

bool gVirtualXRay::PolygonMesh::useVBO	(	int	aBufferUsageHing,
		int	aTypeOfPrimitive
	)

inlineinherited

Use a vertex buffer object if possible.

Parameters

aBufferUsageHing	the buffer usage hint; valid values are: GL_STATIC_DRAW, GL_DYNAMIC_DRAW and GL_STREAM_DRAW
aTypeOfPrimitive	type of primitive; valid values are GL_TRIANGLES

Returns: true if the VBO can be used, false otherwise

Definition at line 168 of file PolygonMesh.inl.

◆ writeSTLFile()

void gVirtualXRay::PolygonMesh::writeSTLFile ( )

inherited

Write the STL file.

Field Documentation

◆ m_bump_map_frame_buffer

unsigned int gVirtualXRay::InternalOrganMesh::m_bump_map_frame_buffer

protectedinherited

Definition at line 308 of file InternalOrganMesh.h.

◆ m_bump_map_shader

Shader gVirtualXRay::InternalOrganMesh::m_bump_map_shader

protectedinherited

Definition at line 312 of file InternalOrganMesh.h.

◆ m_bump_map_texture

unsigned int gVirtualXRay::InternalOrganMesh::m_bump_map_texture

protectedinherited

Definition at line 305 of file InternalOrganMesh.h.

◆ m_colour_texture

unsigned int gVirtualXRay::SoftTissueMesh::m_colour_texture

protectedinherited

Definition at line 165 of file SoftTissueMesh.h.

◆ m_colour_texture_frame_buffer

unsigned int gVirtualXRay::SoftTissueMesh::m_colour_texture_frame_buffer

protectedinherited

Definition at line 168 of file SoftTissueMesh.h.

◆ m_colour_texture_shader

Shader gVirtualXRay::SoftTissueMesh::m_colour_texture_shader

protectedinherited

Definition at line 176 of file SoftTissueMesh.h.

◆ m_display_flag

bool gVirtualXRay::PolygonMesh::m_display_flag

protectedinherited

A flag set to true if you want to display in the Xray image

Definition at line 1626 of file PolygonMesh.h.

◆ m_external_data_flag

bool gVirtualXRay::PolygonMesh::m_external_data_flag

protectedinherited

A flag set to true if the memory is managed outside of this class instance; set to false if the memory is managed by this class instance

Definition at line 1621 of file PolygonMesh.h.

◆ m_file_scale

RATIONAL_NUMBER gVirtualXRay::PolygonMesh::m_file_scale

protectedinherited

Unit of length of the file that contains the polygon mesh (if negative, then unknown)

Definition at line 1553 of file PolygonMesh.h.

◆ m_filename

std::string gVirtualXRay::PolygonMesh::m_filename

protectedinherited

Name of the file that contains the polygon mesh.

Definition at line 1549 of file PolygonMesh.h.

◆ m_generation_texture_coord_are_set

bool gVirtualXRay::InternalOrganMesh::m_generation_texture_coord_are_set

protectedinherited

Definition at line 346 of file InternalOrganMesh.h.

◆ m_gradient_tab

std::vector<VEC3> gVirtualXRay::InternalOrganMesh::m_gradient_tab

protectedinherited

Definition at line 285 of file InternalOrganMesh.h.

◆ m_has_inverted_normal_vectors

bool gVirtualXRay::PolygonMesh::m_has_inverted_normal_vectors

protectedinherited

A flag set to true if the normal vectors are inverted.

Definition at line 1634 of file PolygonMesh.h.

◆ m_has_tendon

int gVirtualXRay::InternalOrganMesh::m_has_tendon

protectedinherited

Definition at line 317 of file InternalOrganMesh.h.

◆ m_has_thin_bumps

int gVirtualXRay::InternalOrganMesh::m_has_thin_bumps

protectedinherited

Definition at line 327 of file InternalOrganMesh.h.

◆ m_index_data_type

int gVirtualXRay::PolygonMesh::m_index_data_type

protectedinherited

Data type of the index data; valid values are GL_UNSIGNED_INT, GL_UNSIGNED_SHORT, GL_UNSIGNED_BYTE and GL_NONE

Definition at line 1606 of file PolygonMesh.h.

◆ m_is_lung

int gVirtualXRay::InternalOrganMesh::m_is_lung

protectedinherited

Definition at line 322 of file InternalOrganMesh.h.

◆ m_label

std::string gVirtualXRay::AnatomicalMesh::m_label

protectedinherited

A label to determine the type of the mesh.

Definition at line 153 of file AnatomicalMesh.h.

◆ m_local_max_corner

VEC3 gVirtualXRay::PolygonMesh::m_local_max_corner

protectedinherited

Upper corner of the bounding box.

Definition at line 1577 of file PolygonMesh.h.

◆ m_local_min_corner

VEC3 gVirtualXRay::PolygonMesh::m_local_min_corner

protectedinherited

Lower corner of the bounding box.

Definition at line 1573 of file PolygonMesh.h.

◆ m_margin_direction

std::vector<VEC2> gVirtualXRay::InternalOrganMesh::m_margin_direction

protectedinherited

Definition at line 301 of file InternalOrganMesh.h.

◆ m_material

Material gVirtualXRay::PolygonMesh::m_material

protectedinherited

Material of the object.

Definition at line 1630 of file PolygonMesh.h.

◆ m_need_initialize

bool gVirtualXRay::InternalOrganMesh::m_need_initialize

protectedinherited

Definition at line 342 of file InternalOrganMesh.h.

◆ m_number_of_indices

unsigned int gVirtualXRay::PolygonMesh::m_number_of_indices

protectedinherited

Number of indices.

Definition at line 1597 of file PolygonMesh.h.

◆ m_number_of_vertices

unsigned int gVirtualXRay::PolygonMesh::m_number_of_vertices

protectedinherited

Number of vertices.

Definition at line 1601 of file PolygonMesh.h.

◆ m_optimize_texture_coordinates

bool gVirtualXRay::InternalOrganMesh::m_optimize_texture_coordinates

protectedinherited

Definition at line 350 of file InternalOrganMesh.h.

◆ m_p_face_normal_vbo

std::auto_ptr<PolygonMesh> gVirtualXRay::PolygonMesh::m_p_face_normal_vbo

protectedinherited

Definition at line 1559 of file PolygonMesh.h.

◆ m_p_index_set

void* gVirtualXRay::PolygonMesh::m_p_index_set

protectedinherited

Array containing the index.

Definition at line 1593 of file PolygonMesh.h.

◆ m_p_vbo

std::auto_ptr<VBO> gVirtualXRay::PolygonMesh::m_p_vbo

protectedinherited

Vertex buffer object.

Definition at line 1558 of file PolygonMesh.h.

◆ m_p_vertex_normal_set

std::vector<RATIONAL_NUMBER> gVirtualXRay::PolygonMesh::m_p_vertex_normal_set

protectedinherited

Array containing the normal vectors (one per triangle)

Array containing the normal vectors (one per vertex)

Definition at line 1585 of file PolygonMesh.h.

◆ m_p_vertex_normal_vbo

std::auto_ptr<PolygonMesh> gVirtualXRay::PolygonMesh::m_p_vertex_normal_vbo

protectedinherited

Definition at line 1560 of file PolygonMesh.h.

◆ m_p_vertex_set

void* gVirtualXRay::PolygonMesh::m_p_vertex_set

protectedinherited

Array containing the vertices.

Definition at line 1589 of file PolygonMesh.h.

◆ m_permutation

std::vector<int> gVirtualXRay::InternalOrganMesh::m_permutation

protectedinherited

Definition at line 289 of file InternalOrganMesh.h.

◆ m_photon_cross_section

PhotonCrossSection gVirtualXRay::PolygonMesh::m_photon_cross_section

protectedinherited

Material properties, with respect to X-ray.

Definition at line 1569 of file PolygonMesh.h.

◆ m_polygon_type

int gVirtualXRay::PolygonMesh::m_polygon_type

protectedinherited

Polygon type; valid values are GL_TRIANGLES.

Definition at line 1615 of file PolygonMesh.h.

◆ m_texture_coordinates_2d

std::vector<VEC2> gVirtualXRay::InternalOrganMesh::m_texture_coordinates_2d

protectedinherited

Definition at line 293 of file InternalOrganMesh.h.

◆ m_texture_coordinates_3d

std::vector<VEC3> gVirtualXRay::InternalOrganMesh::m_texture_coordinates_3d

protectedinherited

Definition at line 297 of file InternalOrganMesh.h.

◆ m_texture_size_2d

unsigned int gVirtualXRay::InternalOrganMesh::m_texture_size_2d

protectedinherited

Definition at line 334 of file InternalOrganMesh.h.

◆ m_texture_size_3d

unsigned int gVirtualXRay::InternalOrganMesh::m_texture_size_3d

protectedinherited

Definition at line 338 of file InternalOrganMesh.h.

◆ m_use_3D_bump_map

int gVirtualXRay::InternalOrganMesh::m_use_3D_bump_map

protectedinherited

Definition at line 330 of file InternalOrganMesh.h.

◆ m_use_3D_colour_texture

int gVirtualXRay::SoftTissueMesh::m_use_3D_colour_texture

protectedinherited

Definition at line 172 of file SoftTissueMesh.h.

◆ m_use_bump_map

int gVirtualXRay::AnatomicalMesh::m_use_bump_map

protectedinherited

1 if the mesh use bump mapping; default value is 0

Definition at line 150 of file AnatomicalMesh.h.

◆ m_use_texture

int gVirtualXRay::AnatomicalMesh::m_use_texture

protectedinherited

1 if the mesh use texturing; default value is 0

Definition at line 147 of file AnatomicalMesh.h.

◆ m_vertex_data_type

int gVirtualXRay::PolygonMesh::m_vertex_data_type

protectedinherited

Data type of the vertex data; valid values are GL_FLOAT, GL_DOUBLE and GL_NONE

Definition at line 1611 of file PolygonMesh.h.

The documentation for this class was generated from the following file:

/home/fpvidal/PROGRAMMING/RELEASE/gVirtualXray-2.0.10-Source/gvxr/include/gVirtualXRay/LiverMesh.h

Public Member Functions

Protected Types

Protected Member Functions

Protected Attributes

Detailed Description

Member Enumeration Documentation

◆ ToCreate

Constructor & Destructor Documentation

◆ LiverMesh()

◆ ~LiverMesh()

Member Function Documentation

◆ applyRotation()

◆ applyScale() [1/2]

◆ applyScale() [2/2]

◆ applyScaling()

◆ applyTransform()

◆ applyTranslation()

◆ computeBoundingBox()

◆ computeNormalVectors()

◆ copyFrom() [1/3]

◆ copyFrom() [2/3]

◆ copyFrom() [3/3]

◆ copyIndexSet()

◆ copyVertexSet()

◆ defineBumpMapShaderInput()

◆ defineColourTextureShaderInput()

◆ defineDisplayShaderInput()

◆ deleteIndices()

◆ destroyIndexData()

◆ destroyVertexData()

◆ display()

◆ displayFaceNormal()

◆ displayVertexNormal()

◆ displayWireFrame()

◆ generate2DTexture()

◆ generate3DTexture()

◆ generateTextures()

◆ getCompound()

◆ getDensity()

◆ getDisplayFlag()

◆ getFaceNormal()

◆ getFaceNormalNumber()

◆ getFaceNumber()

◆ getFilename()

◆ getIndex()

◆ getIndexNumber()

◆ getLabel()

◆ getLocalMaxCorner()

◆ getLocalMinCorner()

◆ getMaterial() [1/2]

◆ getMaterial() [2/2]

◆ getMaterialLabel()

◆ getMixtureElementSet()

◆ getMixtureWeightSet()

◆ getPhotonCrossSection()

◆ getTriangleNumber()

◆ getTriangleVertices()

◆ getUnitOfLength()

◆ getVertex()

◆ getVertexNormal()

◆ getVertexNormalNumber()

◆ getVertexNumber()

◆ hasNormalVectorsInverted()

◆ initGradientTab()

◆ initialize()

◆ initialize2DBuffer()

◆ initialize2DTextureCoordinates()

◆ initialize3DBuffer()

◆ initialize3DTextureCoordinates()

◆ initPermutation()

◆ invertNormalVectors()

◆ isSoftTissue()

◆ isTransparent()

◆ load2DBumpShader()

◆ load3DBumpShader()

◆ loadASCIISTLFile()

◆ loadBinarySTLFile()

◆ loadSTLDataFromBinaryStream()

◆ loadSTLFile()

◆ mergeVertices()